Self Experiments In the Biochemically Unoptimized State

Self Experiments In the Biochemically Unoptimized State

Author: Chris Masterjohn, PhD April 12, 2023 Duration: 3:24:10

Finally, the long-awaited results of my self-experiments conducted from September through January are released!

First, make sure you get my MTHFR Protocol, my free 7-page quick guide to optimizing and personalizing your methylation status, here: https://chrismasterjohnphd.com/blog/2019/03/01/start-here-for-mthfr-and-methylation

The primary abnormalities in my metabolism during this pre-biotin period were 1) 15 minutes of paradoxical rise in ketones after eating rice, 2) paradoxical rise in lactate during fasting that is suppressed by my meals, and 3) a massively outsized lactate response to alcohol. The first two were provoked by an 18-hour fast and the last by undereating prior to the alcohol.

These support a deficiency in the biotin-dependent, manganese-dependent, oxalate-poisoned enzyme pyruvate carboxylase.

This is long, and if your time is limited, you may want to skip to "The Bottom Line" in this link: https://chrismasterjohnphd.substack.com/p/self-experiments-in-the-biochemically

However, there are some major reasons to commit some time to reading the whole report: It serves as a crash course on the most relevant biochemistry of glucose, ketones, lactate, and ethanol across contexts that include general health, diabetes, infancy, and pregnancy. It includes a literature review of all of the relevant "normal" data.

For example, what usually happens to lactate during fasting?

What is the normal response of ketones to a glucose tolerance test at the 15-minute mark?

How high should you expect your lactate to go up when you drink vodka, bourbon, or beer?

I have laid out a model of self-experimentation that you can borrow from for your own experiments.

 There are many thought-provoking nuggets in here.

For example: Is it possible that two pounds of extra body fat prevents peripheral neuropathy in me and perhaps others? I make the case that it may.

Has your fasting glucose gone up on low-carb? See why mine went down after doing repeated glucose tolerance tests on myself (which I don't recommend at home!) 

And, learn why I can fast my way to a glucose of 70 or eat my way to a glucose of 70 and I would choose eating my way there every time.

The full written version with linked references is found here: https://chrismasterjohnphd.substack.com/p/self-experiments-in-the-biochemically

And don't forget to get my MTHFR Protocol, my free 7-page quick guide to optimizing and personalizing your methylation status, here:

https://chrismasterjohnphd.com/blog/2019/03/01/start-here-for-mthfr-and-methylation

Chris Masterjohn, PhD, is the Founder and Scientific Director of the mitochondria test Mitome.


Chris Masterjohn, PhD hosts Mastering Nutrition, a podcast that digs into the science of how our bodies work at a fundamental level. The focus here is on mitochondrial health-the energy powerhouses within our cells-and how optimizing them forms the cornerstone of lasting vitality. Chris brings his background as a nutrition scientist and his experience founding BioOptHealth to these conversations, which move beyond generic diet advice. Instead, the podcast explores how individual differences, informed by tools like whole genome sequencing and detailed biochemical data, can reveal personalized paths to better metabolic function. Listeners will hear deep dives into cutting-edge research, practical interpretations of complex studies, and discussions on how to apply these insights in a real-world context. This isn't about quick fixes or trending superfoods; it's about building a coherent, scientifically-grounded understanding of nutrition from the cellular level up. Each episode aims to provide the kind of nuanced, evidence-based perspective that can help you make sense of conflicting health information. Whether the topic is a specific nutrient, a metabolic pathway, or a broader principle of wellness, Chris works to translate dense science into actionable knowledge. Tune in for a thoughtful, detailed exploration of what it truly means to master your own nutritional landscape.
Author: Language: English Episodes: 712

Mastering Nutrition
Podcast Episodes
Isocitrate Dehydrogenase | MWM Energy Metabolism Cliff Notes #6 [not-audio_url] [/not-audio_url]

Duration: 10:48
This lesson looks at the third step of the citric acid cycle in much more detail, digging into the organic chemistry concepts involved in the conversion of isocitrate to α-ketoglutarate. We dive deep into this because it…
Dry Skin When Adding Muscle? Think Zinc. | Chris Masterjohn Lite #30 [not-audio_url] [/not-audio_url]

Duration: 4:15
Do you get dry skin when you put on muscle mass? It could be a zinc deficiency. Here's how to take care of it. To get these episodes free of ads, with transcripts, and weeks or sometimes even months before they are relea…
Cellular Respiration| MWM Energy Metabolism Cliff Notes #3 [not-audio_url] [/not-audio_url]

Duration: 9:33
This lesson provides an overview of the basic objectives of using the citric acid cycle and the electron transport chain to make ATP. We start here because, no matter whether we burn protein, carbs, or fat, these two int…
Activation Energy & Enzymes | MWM Energy Metabolism Cliff Notes #2 [not-audio_url] [/not-audio_url]

Duration: 7:47
The second MWM energy metabolism looks at how we use enzymes to exert exquisite control over what happens inside our bodies. If the second law of thermodynamics holds that entropy is always increasing, why don't we reach…
Thermodynamics | MWM Energy Metabolism Cliff Notes #1 [not-audio_url] [/not-audio_url]

Duration: 7:34
The first MWM Energy Metabolism lesson answers the question, why do we have to eat such an enormous amount of food? The answer is to comply with the second law of thermodynamics. If you have a chemistry background, you s…
Introducing the Energy Metabolism CLIFF NOTES! [not-audio_url] [/not-audio_url]

Duration: 5:39
Masterclass With Masterjohn Energy Metabolism is a structured course that begins with foundational principles and progresses to advanced topics to give you everything you need to know about the biochemistry of how we bre…
[not-audio_url] [/not-audio_url]

Duration: 0:00
MTHFR is an enzyme that allows folate (vitamin B9) to support the cellular process of methylation, which is important for the synthesis of creatine and phosphatidylcholine, the regulation of gene expression, neurotransmi…
Living With MTHFR | Mastering Nutrition #37 [not-audio_url] [/not-audio_url]

Duration: 2:01:50
MTHFR is an enzyme that allows folate (vitamin B9) to support the cellular process of methylation, which is important for the synthesis of creatine and phosphatidylcholine, the regulation of gene expression, neurotransmi…