From the archive: Of molecules and memories

From the archive: Of molecules and memories

Author: Kensy Cooperrider – Diverse Intelligences Summer Institute August 22, 2025 Duration: 1:15:10

Hi friends!

We're taking a much-needed August pause—we'll have new episodes for you in September. In the meanwhile, enjoy this pick from our archives!

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[originally aired February 8, 2024]

Where do memories live in the brain? If you've ever taken a neuroscience class, you probably learned that they're stored in our synapses, in the connections between our neurons. The basic idea is that, whenever we have an experience, the neurons involved fire together in time, and the synaptic connections between them get stronger. In this way, our memories for those experiences become minutely etched into our brains. This is what might be called the synaptic view of memory—it's the story you'll find in textbooks, and it's often treated as settled fact. But some reject this account entirely. The real storehouses of memory, they argue, lie elsewhere. 

My guest today is Dr. Sam Gershman. Sam is Professor of Psychology at Harvard University, and the director of the Computational Cognitive Neuroscience Lab there. In a recent paper, he marshals a wide-ranging critique of the synaptic view. He makes a compelling case that synapses can't be the whole story—that we also have to look inside the neurons themselves. 

Here, Sam and I first discuss the synaptic view and the evidence that seems to support it. We then talk about some of the problems with this classic picture. We consider, for example, cases where memories survive the radical destruction of synapses; and, more provocatively, cases where memories are formed in single-celled organisms that lack synapses altogether. We talk about the dissenting view, long lurking in the margins, that intracellular molecules like RNA could be the real storage sites of memory. Finally, we talk about Sam's new account—a synthesis that posits a role for both synapses and molecules. Along the way we touch on planaria and paramecia; spike-timing dependent plasticity; the patient H.M.; metamorphosis, hibernation, and memory transfer; the pioneering work of Beatrice Gelber; unfairly maligned ideas; and much, much more.

Before we get to it, one important announcement: Applications are now open for the 2024 Diverse Intelligences Summer Institute (or DISI)! The event will be held in beautiful, seaside St Andrews, Scotland, from June 30 to July 20. If you like this show—if you like the conversations we have and the questions we ask—it's a safe bet that you'd like DISI. You can find more info at disi.org—that's disi.org. Review of applications will begin on Mar 1, so don't delay. 

Alright friends, on to my conversation about the biological basis of memory with Dr. Sam Gershman. Enjoy!

 

Notes and links

4:00 - A general audience article on planarian memory transfer experiments and the scientist who conducted them, James V. McConnell. 

8:00 - For more on Dr. Gershman's research and general approach, see his recent book and the publications on his lab website. 

9:30 - A brief video explaining long-term potentiation. An overview of "Hebbian Learning." The phrase "neurons that fire together wire together" was, contrary to widespread misattribution, coined by Dr. Carla Shatz here.

12:30 - The webpage of Dr. Jeremy Gunawardena, Associate Professor of Systems Biology at Harvard University. A recent paper from Dr. Gunawardena's lab on the avoidance behaviors exhibited by the single-celled organism Stentor (which vindicates some disputed, century-old findings).  

14:00 - A recent paper by C. R. Gallistel describing some of his views on the biological basis of memory.  

19:00 - The term "engram" refers to the physical trace of a memory. See recent reviews about the so-called search for the engram herehere, and here.  

20:00 - An article on the importance of H.M. in neuroscience. 

28:00 - A review about the phenomenon of spike-timing dependent plasticity.

33:00 - An article, co-authored by former guest Dr. Michael Levin, on the evidence for memory persistence despite radical remodeling of brain structures. See our episode with Dr. Levin here.

35:00 - A study reporting the persistence of memories in decapitated planarians. A popular article about these findings. 

36:30 - An article reviewing one chapter in the memory transfer history. Another article reviewing evidence for "vertical" memory transfer (between generations).

39:00 - For more recent demonstrations of memory transfer, see here and here.

40:00 - A paper by Dr. Gershman, Dr. Gunawardena, and colleagues reconsidering the evidence for learning in single cells and describing the contributions of Dr. Beatrice Gelber. A general audience article about Gelber following the publication of the paper by Dr. Gershman and colleagues.

45:00 – A recent article arguing for the need to understand computation in single-celled organisms to understand how computation evolved more generally. 

46:30 – Another study of classical conditioning in paramecia, led by Dr. Todd Hennessey.

49:00 – For more on plant signaling, see our recent episode with Dr. Paco Calvo and Dr. Natalie Lawrence. 

56:00 – A recent article on "serial reversal learning" and its neuroscientific basis. 

1:07:00 – A 2010 paper demonstrating a role for methylation in memory.

 

Recommendations

The Behavior of the Lower Organisms, by Herbert Spencer Jennings

Memory and the Computational Brain, by C. R. Gallistel and Adam Philip King

Wetware, by Dennis Bray

 

Many Minds is a project of the Diverse Intelligences Summer Institute, which is made possible by a generous grant from the John Templeton Foundation to Indiana University. The show is hosted and produced by Kensy Cooperrider, with help from Assistant Producer Urte Laukaityte and with creative support from DISI Directors Erica Cartmill and Jacob Foster. Our artwork is by Ben OldroydOur transcripts are created by Sarah Dopierala.

Subscribe to Many Minds on Apple, Stitcher, Spotify, Pocket Casts, Google Play, or wherever you listen to podcasts. You can also now subscribe to the Many Minds newsletter here!

We welcome your comments, questions, and suggestions. Feel free to email us at: manymindspodcast@gmail.com.

For updates about the show, visit our website or follow us on Twitter (@ManyMindsPod) or Bluesky (@manymindspod.bsky.social).


There's a quiet revolution happening in how we understand intelligence, and it's not just about humans. Many Minds, hosted by Kensy Cooperrider of the Diverse Intelligences Summer Institute, digs into this expansive idea. Each episode is a journey into the inner worlds of creatures and creations we share the planet with. You'll hear from researchers who decode the complex social minds of crows, who map the sensory universe of an octopus, or who grapple with the emerging cognition of artificial systems. This isn't a dry lecture series; it's a collection of thoughtful conversations that feel like pulling up a chair with experts who are genuinely redefining what it means to think, feel, and learn. The Many Minds podcast operates from a simple but profound premise: to grasp our own human experience, we need to listen to the many other kinds of minds around us. Tune in every other week for explorations that are as much about philosophy and wonder as they are about science and education, all grounded in rigorous research and a deep curiosity about the beings-animal, human, and artificial-that fill our world.
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